PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00458.180
Common NameJCGZ_06329, LOC105635035
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 183aa    MW: 19738 Da    PI: 4.0042
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00458.180genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.12.1e-132441055
             AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++g+Wv eIr+p++   + r++lg+f tae+Aa+a++ a+ +++g
  Jcr4S00458.180  2 RSWGKWVLEIREPRK---KSRIWLGTFPTAEMAARAHDVAAMSIKG 44
                    57**********843...6**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.1E-25158IPR001471AP2/ERF domain
CDDcd000185.98E-26153No hitNo description
PROSITE profilePS5103219.664152IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-25153IPR001471AP2/ERF domain
PfamPF008474.4E-8244IPR001471AP2/ERF domain
SuperFamilySSF541712.68E-16252IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MRSWGKWVLE IREPRKKSRI WLGTFPTAEM AARAHDVAAM SIKGNAAILN FPEIVDSLPR  60
PVSLMPRDIQ AAAAKAASMV EFNSLSSSSS SSSLLSESSS SSSSSSVSVS DDVSESEELS  120
EIVELPNIEG SFDSAESVTE FILFDSVDGW VYPPPQDMCG EFSDQLMGLE SLISSNFGAS  180
VWD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012073419.11e-127PREDICTED: dehydration-responsive element-binding protein 3
SwissprotQ9LYD36e-58DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLA0A067KQN01e-127A0A067KQN0_JATCU; Uncharacterized protein
STRINGPOPTR_0003s04920.13e-73(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-51ERF family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]